Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015927188.1_cds_XP_016475097.1_67059
CDS Infomation

[gene=LOC107796792] [db_xref=GeneID:107796792] [protein=diaminopimelate epimerase, chloroplastic-like] [protein_id=XP_016475097.1] [location=join(126029..126319,127177..127344,129801..129871,134511..134568,134837..135016,135520..135604,136349..136408,136518..136591,136732..136848)] [gbkey=CDS]
Sequence

ATGGCCATCGCCGCCGCAATTACGGTGCCTCTCACAACCCCAAGCCGTCGTTTTCTTGCT
TCTGCTTCCGCTAATCCCATTCGATTTTCTTCTCCTTTAACTGCACAACCAAAATATCTC
AAAATCGCTGCCGGTAGAGGAACACAGTGCCCTAATTTCCGCATTTGTGCGGCATCTTCA
ATGAGAATCGAAGCTCCGGAGAAAGCTTCTCCAGATTCTTTCCTTGACCGTAAGGAAAGC
GGCATTCTTCACTTCGTCAAGTACCACGGCCTCGGCAACGACTTCATATTGGTTGACAAT
AGAGATACAACAGAACCTAAGGTCAGTCCTGATCAAGCTGTGCAACTATGTGACAGAAAC
TTCGGAATTGGTGCTGATGGCGTGATATTTGCAATGCCGGGTGTCAATGGCACTGATTAT
ACCATGAGGATCTTCAATTCAGATGGAAGCGAGCCAGAGATGTGTGGTAATGGAATTCGA
TGCCTTGCCAAATTTATAGCGGAGCTTGAGAACTCCCGTGGAAAGCGAAGTTTCACCATA
CATACAGGGGCTGGACTTATTGTTCCTGAGATTCAAGAAGATGGAAAGGTTAGGGTTGAC
ATGGGTGAACCCATTCTGAAGGCATCAGATGTACCCACGAAACTACCCCCTAATAAAGAT
CAATCTGTTGTTAAAGCAAGACTAGATGTAGATGGAAGTGAATGGAATGTGACCTGTGTC
AGCATGGGAAATCCTCATTGTGTCACTTTTGGTACATCACAAAGCCAGGATTTGCATGTA
GATGAATTGAATTTAGCAGACATTGGCCCAAAGTTTGAACATCATGTGATGTTCCCTGCT
CGCACTAACACAGAATTTGTACAAGTCTTCTCCCCAACACACCTTAAAATGCATGTCTGG
GAGCGTGGTGCAGGCGCGACACTAGCCTGTGGGACAGGAGCTTGTGCCGTAGTTGTTGCA
GCAGTGCTCGAGGGTCGTGCTGCAAGGCGGTGTACTGTTGATTTGCCTGGTGGGCCTCTG
GACATTGAGTGGAGTGAGAAAGACAACCATATATACATGACGGGGCCAGCAGAGGTAGTT
TTCTATGGGTCAGTTCCTCTTTAA

Peptide Sequence

PEP ID

XP_016475097.1
PEP Infomation

PREDICTED: diaminopimelate epimerase, chloroplastic-like [Nicotiana tabacum]
Sequence

MAIAAAITVPLTTPSRRFLASASANPIRFSSPLTAQPKYLKIAAGRGTQCPNFRICAASS
MRIEAPEKASPDSFLDRKESGILHFVKYHGLGNDFILVDNRDTTEPKVSPDQAVQLCDRN
FGIGADGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGIRCLAKFIAELENSRGKRSFTI
HTGAGLIVPEIQEDGKVRVDMGEPILKASDVPTKLPPNKDQSVVKARLDVDGSEWNVTCV
SMGNPHCVTFGTSQSQDLHVDELNLADIGPKFEHHVMFPARTNTEFVQVFSPTHLKMHVW
ERGAGATLACGTGACAVVVAAVLEGRAARRCTVDLPGGPLDIEWSEKDNHIYMTGPAEVV
FYGSVPL

Transcript Sequence

Gene sequence data has not been registered.